Setup Notes

Gnuplot Setup
Download latest Gnuplot version source code (4.6.0 at time of this
writing): http://sourceforge.net/projects/gnuplot/files/
Mac Gnuplot Setup
Short story: for legal reasons, Apple does not use ship Gnu Readline
library by default. The replacement library does not have all the
functionality needed for gnuplot, and this often causes errors.

Download the latest version of Gnu Readline:
ftp://ftp.cwru.edu/pub/bash/readline-6.2.tar.gz

Untar it, cd to the new folder, and execute
./configure --prefix=/usr, then make everything, then
sudo make install.
Then cd into the gnuplot source folder. Use ./configure, make,
and sudo make install.

SPOCC Setup

Applied all Mac OS X Software Updates (Version 10.6.8)
Installed all Mac OS X Developer Tools (from the XCode Installer on
the Mac OS X Application Install DVD)
Installed Python 2.7.2
64-bit

Installed Google Chrome

Added http://699samiam.org/samwiki to bookmarks bar (also did
to Safari)
Enabled bookmarks bar

Installed Cyberduck 4.2.1

Removed 3rd-party bookmarks
Bookmarked SAMIAM-v

Bookmarked LabCVS

Installed OpenOffice 3.3.0

Installed Text Wrangler
3.5.3

Installed GNU Readline
6.2

Downloaded the source code for version
6.2

From terminal, extracted contents of the .tar.gz file and used
`cd` to go to the newly-extracted directory
Executed `./configure --prefix=/usr`
Executed `make everything`
Executed `sudo make install`

Installed Gnuplot 4.4.0

Downloaded Gnuplot source
code

From terminal, extracted contents of .tar.gz file and used
`cd` to go to the newly-extracted directory
Executed `./configure`
Executed `make`
Executed `sudo make install`

Installed MacTeX (very long
download; try to use the saved zip file from another SPOCC computer)
Installed SAM Data View

''We are not going to use the standard installer (with the
telemetry database, sample data, etc.) in the future. I did for
this install, and I removed `~/SAM/gse` from the filesystem.
There were some file permissions problems; I changed the
permissions of ~/SAM to 755.''

Installed XINA

Extracted the downloadable zip file
Renamed the newly-extracted folder to XINA, and moved it to the
Applications directory

Set up password-free access to LabCVS (Note: For the following: let
`LABCVS` be the IP address for the LabCVS machine, and `USER` be
the username. I did not want to post either in public.)

From terminal, executed `ssh-keygen -t rsa`.
From terminal, executed `cat .ssh/id_rsa.pub | ssh USER@LABCVS
"cat >> .ssh/authorized_keys"`

Did initial CVS configuration (See previous note about `LABCVS`
and `USER`)

From terminal, executed `export
CVSROOT=":ext:USER@LABCVS:/labcvs/labcode"`
From terminal, executed `export CVS_RSH=ssh`
From terminal, executed `cd $HOME`
From terminal, executed `cvs co spocc`
Deleted existing copy of $HOME/.bash_profile
From terminal (assumed to be in home directory still), executed
`ln -s spocc/bash_profile_ref .bash_profile`

Exited and restarted terminal to let changes take effect.
Checked out gse directory from CVS

From terminal (in home directory), executed `cvs checkout gse`
From terminal, executed `cd ~/SAM; ln -s ../gse gse`
From terminal, executed `mkdir ~/gse/data`

Checked out Python code from CVS

From terminal (in home directory), executed `cvs checkout
labcode/tmutil`
From terminal (in home directory), executed `cvs checkout
labcode/samutil`
From terminal (in home directory), executed `cvs checkout
labcode/tmdataflow`

Set up automatic updating (requires password-free LabCVS access; see
above)

Created alias to `~/spocc/update_spocc.command` on the
Desktop, and renamed `CLICK HERE TO UPDATE SPOCC`

Added `~/spocc/update_spocc.command` as a Login Item (updates
CVS directories on login)
: Under System Preferences -> Users -> Username -> Login
Items -> "+" (Where "Username" is the SPOCC username).

Downloaded all SAM Data

Created the following directories under `~/gse/data`:
`data-2007`, `data-2008`, `data-2009`, `data-2010`,
`data-2011`
Downloaded data from 2007-2010 into appropriate subdirectories
from ftp://samiam-v.gsfc.nasa.gov

Downloaded all 2011 data directly from LabCVS (SAMIAM-V is out
of date) into `data-2011` subdirectory.

Miscellaneous system tweaks

Enabled Spaces
Enabled Exposé (corner shortcuts)
Increased mouse tracking speed, keyboard repeat rate
Removed household applications (iTunes, iPhoto, etc.) from Dock
and added newly-installed applications

Installed Microsoft Office
Installed Net Connect (by logging into http://vpn.jpl.nasa.gov.

Ops VM Setup

Applied all Ubuntu software updates.
Used Synaptic package manager to install the following packages and
their dependencies:

Development

cervisia
cvs
default-jdk
g++
g++-4.4
gcc-doc
gfortran
gfortran-doc
git-core
git-doc
subversion
qt4-designer
qt4-dev-tools
qt4-qmake

Development (universe)

eclipse

Libraries - Development

libgsl0-dev

Mathematics (universe)

gnuplot
libgsl0ldbl

Networking (universe)

filezilla

Python Programming Language

python-numpy
python-numpy-doc
python-setuptools
python3.1

Python Programming Language (universe)

pylint
python-argparse
python-gnuplot
python-scientific
python-scipy
python-scitools

TeX Authoring

texlive-latex-base
texlive-latex-extra
texlive-latex-recommended

Word Processing

enscript

Downloaded and installed Google Chrome.
Downloaded source code for Python 2.7.2. Compiled and installed with
`make altinstall`.
Downloaded Pydev within Eclipse.
:* Added Python2.7 interpreter.